STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ16952.1Zn-dependent alcohol dehydrogenase. (333 aa)    
Predicted Functional Partners:
SDY89315.1
Hypothetical protein.
  
  0.735
SDY90484.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
0.707
SDZ33540.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
 
0.706
SDZ09956.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
 
0.705
SDY98278.1
Myxalamid-type polyketide synthase MxaB.
  
 0.662
SDZ40427.1
NADPH:quinone reductase.
  
 
  0.644
SDY15803.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
  0.617
SDZ28045.1
Ferredoxin-NADP reductase.
  
 
  0.613
SDZ36362.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.613
ispD-2
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
   
 0.609
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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