STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ21405.1Protein of unknown function. (253 aa)    
Predicted Functional Partners:
SDZ21388.1
ATPase family associated with various cellular activities (AAA).
 
     0.897
SDZ21427.1
Hypothetical protein.
 
     0.894
SDZ21372.1
Protein of unknown function.
 
     0.888
SDZ15081.1
ATPase family associated with various cellular activities (AAA).
 
     0.800
SDZ21600.1
LysM domain-containing protein.
 
     0.788
SDZ14636.1
Hypothetical protein.
 
     0.787
SDZ21498.1
Hypothetical protein.
 
     0.787
SDZ21532.1
Hypothetical protein.
 
     0.787
SDZ21512.1
Conserved hypothetical phage tail region protein.
 
     0.786
SDZ21632.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
 
     0.782
Your Current Organism:
Micromonospora pattaloongensis
NCBI taxonomy Id: 405436
Other names: DSM 45245, JCM 12833, M. pattaloongensis, Micromonospora pattaloongensis Thawai et al. 2008, strain TJ2-2
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