Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY08529.1 | SDZ04486.1 | SAMN05444365_101615 | SAMN05444365_10521 | ATP-dependent DNA helicase DinG. | Non-specific serine/threonine protein kinase. | 0.916 |
SDY08529.1 | SDZ40489.1 | SAMN05444365_101615 | SAMN05444365_11379 | ATP-dependent DNA helicase DinG. | WD40 repeat. | 0.905 |
SDY08529.1 | rpoA | SAMN05444365_101615 | SAMN05444365_103407 | ATP-dependent DNA helicase DinG. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
SDY08529.1 | rpoB | SAMN05444365_101615 | SAMN05444365_103445 | ATP-dependent DNA helicase DinG. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
SDY08529.1 | rpoZ | SAMN05444365_101615 | SAMN05444365_11037 | ATP-dependent DNA helicase DinG. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.989 |
SDY40187.1 | SDZ40489.1 | SAMN05444365_102150 | SAMN05444365_11379 | Hypothetical protein. | WD40 repeat. | 0.923 |
SDY47952.1 | SDY98763.1 | SAMN05444365_102389 | SAMN05444365_104449 | Acetoin utilization protein AcuC. | Conserved hypothetical protein. | 0.882 |
SDY47952.1 | SDZ04486.1 | SAMN05444365_102389 | SAMN05444365_10521 | Acetoin utilization protein AcuC. | Non-specific serine/threonine protein kinase. | 0.987 |
SDY47952.1 | SDZ40489.1 | SAMN05444365_102389 | SAMN05444365_11379 | Acetoin utilization protein AcuC. | WD40 repeat. | 0.960 |
SDY98763.1 | SDY47952.1 | SAMN05444365_104449 | SAMN05444365_102389 | Conserved hypothetical protein. | Acetoin utilization protein AcuC. | 0.882 |
SDY98763.1 | SDZ04486.1 | SAMN05444365_104449 | SAMN05444365_10521 | Conserved hypothetical protein. | Non-specific serine/threonine protein kinase. | 0.942 |
SDY98763.1 | SDZ40489.1 | SAMN05444365_104449 | SAMN05444365_11379 | Conserved hypothetical protein. | WD40 repeat. | 0.917 |
SDZ04486.1 | SDY08529.1 | SAMN05444365_10521 | SAMN05444365_101615 | Non-specific serine/threonine protein kinase. | ATP-dependent DNA helicase DinG. | 0.916 |
SDZ04486.1 | SDY47952.1 | SAMN05444365_10521 | SAMN05444365_102389 | Non-specific serine/threonine protein kinase. | Acetoin utilization protein AcuC. | 0.987 |
SDZ04486.1 | SDY98763.1 | SAMN05444365_10521 | SAMN05444365_104449 | Non-specific serine/threonine protein kinase. | Conserved hypothetical protein. | 0.942 |
SDZ04486.1 | SDZ40489.1 | SAMN05444365_10521 | SAMN05444365_11379 | Non-specific serine/threonine protein kinase. | WD40 repeat. | 0.947 |
SDZ04486.1 | rpoA | SAMN05444365_10521 | SAMN05444365_103407 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
SDZ04486.1 | rpoB | SAMN05444365_10521 | SAMN05444365_103445 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
SDZ04486.1 | rpoZ | SAMN05444365_10521 | SAMN05444365_11037 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.992 |
SDZ40489.1 | SDY08529.1 | SAMN05444365_11379 | SAMN05444365_101615 | WD40 repeat. | ATP-dependent DNA helicase DinG. | 0.905 |
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