STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG64971.1Sel1 repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KRG66011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
 0.850
KRG63695.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.850
KRG64942.1
Fe(II)-dependent oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.832
KRG63118.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
KRG64943.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.653
KRG62967.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.560
KRG64195.1
Integrase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.516
KRG64941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
KRG63274.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.477
KRG62594.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.440
Your Current Organism:
Stenotrophomonas humi
NCBI taxonomy Id: 405444
Other names: DSM 18929, LMG 23959, LMG:23959, S. humi, Stenotrophomonas humi Heylen et al. 2007, Stenotrophomonas sp. R-32729, strain R-32729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.