STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG61935.1Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
KRG63245.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.788
KRG62716.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.540
KRG62448.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.
  
 
   0.472
KRG63994.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.466
KRG61934.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
KRG62089.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.462
KRG65536.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.460
KRG65317.1
D-aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.444
KRG64203.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.437
KRG63129.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.
     
 0.434
Your Current Organism:
Stenotrophomonas humi
NCBI taxonomy Id: 405444
Other names: DSM 18929, LMG 23959, LMG:23959, S. humi, Stenotrophomonas humi Heylen et al. 2007, Stenotrophomonas sp. R-32729, strain R-32729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.