STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS55021.1Taurine dehydrogenase small subunit. (131 aa)    
Predicted Functional Partners:
SIS55037.1
Taurine dioxygenase/taurine dehydrogenase large subunit.
 
     0.947
SIS55053.1
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
  
  0.871
SIS54991.1
C4-dicarboxylate transporter, DctM subunit.
 
     0.860
SIS55003.1
C4-dicarboxylate transporter, DctM subunit.
 
     0.805
SIS54977.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
     0.782
SIS55070.1
Conserved hypothetical integral membrane protein.
 
     0.701
SIS55080.1
Phosphotransacetylase.
 
     0.681
SIS54966.1
Transcriptional regulator, GntR family.
 
     0.653
SIS64351.1
Hypothetical protein.
  
     0.484
SIS55946.1
Hypothetical protein.
  
     0.479
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.