Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS70844.1 | SIS70856.1 | SAMN05421772_103150 | SAMN05421772_103151 | Uncharacterized membrane protein YfcA. | SAM-dependent methyltransferase. | 0.611 |
SIS70844.1 | SIS70865.1 | SAMN05421772_103150 | SAMN05421772_103152 | Uncharacterized membrane protein YfcA. | PIN domain-containing protein. | 0.592 |
SIS70844.1 | SIS79819.1 | SAMN05421772_103150 | SAMN05421772_10566 | Uncharacterized membrane protein YfcA. | L-lactate dehydrogenase (cytochrome). | 0.526 |
SIS70844.1 | dusA | SAMN05421772_103150 | SAMN05421772_103222 | Uncharacterized membrane protein YfcA. | tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | 0.494 |
SIS70844.1 | pgi | SAMN05421772_103150 | SAMN05421772_103155 | Uncharacterized membrane protein YfcA. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.458 |
SIS70844.1 | pgl | SAMN05421772_103150 | SAMN05421772_103154 | Uncharacterized membrane protein YfcA. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.460 |
SIS70844.1 | zwf | SAMN05421772_103150 | SAMN05421772_103153 | Uncharacterized membrane protein YfcA. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.460 |
SIS70856.1 | SIS70844.1 | SAMN05421772_103151 | SAMN05421772_103150 | SAM-dependent methyltransferase. | Uncharacterized membrane protein YfcA. | 0.611 |
SIS70856.1 | SIS70865.1 | SAMN05421772_103151 | SAMN05421772_103152 | SAM-dependent methyltransferase. | PIN domain-containing protein. | 0.865 |
SIS70856.1 | pgi | SAMN05421772_103151 | SAMN05421772_103155 | SAM-dependent methyltransferase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.629 |
SIS70856.1 | pgl | SAMN05421772_103151 | SAMN05421772_103154 | SAM-dependent methyltransferase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.604 |
SIS70856.1 | zwf | SAMN05421772_103151 | SAMN05421772_103153 | SAM-dependent methyltransferase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.594 |
SIS70865.1 | SIS70844.1 | SAMN05421772_103152 | SAMN05421772_103150 | PIN domain-containing protein. | Uncharacterized membrane protein YfcA. | 0.592 |
SIS70865.1 | SIS70856.1 | SAMN05421772_103152 | SAMN05421772_103151 | PIN domain-containing protein. | SAM-dependent methyltransferase. | 0.865 |
SIS70865.1 | pgi | SAMN05421772_103152 | SAMN05421772_103155 | PIN domain-containing protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.580 |
SIS70865.1 | pgl | SAMN05421772_103152 | SAMN05421772_103154 | PIN domain-containing protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.594 |
SIS70865.1 | zwf | SAMN05421772_103152 | SAMN05421772_103153 | PIN domain-containing protein. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.594 |
SIS79819.1 | SIS70844.1 | SAMN05421772_10566 | SAMN05421772_103150 | L-lactate dehydrogenase (cytochrome). | Uncharacterized membrane protein YfcA. | 0.526 |
dusA | SIS70844.1 | SAMN05421772_103222 | SAMN05421772_103150 | tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. | Uncharacterized membrane protein YfcA. | 0.494 |
pgi | SIS70844.1 | SAMN05421772_103155 | SAMN05421772_103150 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Uncharacterized membrane protein YfcA. | 0.458 |
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