STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS93905.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (254 aa)    
Predicted Functional Partners:
SIT16254.1
Enterobactin synthetase component F.
  
 0.861
SIS93924.1
Ribitol 2-dehydrogenase.
 
 
 
0.805
SIS52185.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.777
SIS84924.1
Sulfate permease, SulP family.
    
  0.777
SIS61885.1
NADH dehydrogenase subunit M.
   
  0.776
SIS77483.1
Glutamate synthase (NADPH) large subunit.
     
 0.745
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.737
SIS58635.1
Hypothetical protein.
    
  0.726
SIT09041.1
Hypothetical protein.
    
  0.726
SIS95936.1
Arylsulfatase.
   
  0.702
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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