STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS96039.1Kynurenine formamidase. (260 aa)    
Predicted Functional Partners:
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.932
SIS96054.1
Short-chain dehydrogenase.
 
     0.897
SIS96092.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
     0.877
SIS96102.1
Phenylpropionate dioxygenase, large terminal subunit.
 
     0.877
SIS96028.1
Short-chain dehydrogenase.
 
    0.875
SIS96208.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
  
  0.858
SIS96065.1
Acetyl-CoA acetyltransferase.
 
     0.855
SIS96197.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit.
 
     0.823
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
 0.817
SIS96077.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
  
  0.781
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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