STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS99697.1Transcriptional regulator, LacI family. (345 aa)    
Predicted Functional Partners:
SIT18243.1
Capsular polysaccharide transport system permease protein.
  
  
  0.895
SIT13580.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  
  
  0.882
SIS84742.1
Oligopeptide transport system substrate-binding protein.
     
 0.869
SIS77388.1
Phosphonate transport system substrate-binding protein.
   
 
  0.867
SIT17889.1
Phosphonate transport system substrate-binding protein.
   
 
  0.867
SIS56462.1
Phosphonate transport system substrate-binding protein.
   
 
  0.866
SIS85368.1
Microcin C transport system substrate-binding protein.
     
 0.866
SIS87993.1
Peptide/nickel transport system substrate-binding protein.
     
 0.866
SIT13068.1
Phosphonate transport system substrate-binding protein.
   
 
  0.866
SIS99726.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.834
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.