STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT01181.1hygromycin-B 7''-O-kinase. (319 aa)    
Predicted Functional Partners:
SIS50239.1
Siderophore synthetase component.
  
   0.702
SIT01171.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.560
SIS52786.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.557
SIS63576.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.557
SIS91176.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.557
SIS99061.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.557
SIS50254.1
Siderophore synthetase component.
  
     0.555
SIS98726.1
Thiamine diphosphokinase.
    
  0.449
SIS80983.1
Protein N-acetyltransferase, RimJ/RimL family.
  
 
   0.447
SIT16254.1
Enterobactin synthetase component F.
  
  
 0.438
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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