STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT02933.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
SIT02907.1
Peptide/nickel transport system permease protein.
 
  0.957
SIT02918.1
Peptide/nickel transport system permease protein.
 
 
  0.952
SIT02925.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.846
SIS76954.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.842
SIS84715.1
Oligopeptide transport system permease protein.
 
 
  0.830
SIT02943.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.814
SIS94199.1
Peptide/nickel transport system permease protein.
 
 
  0.785
SIS84742.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.779
SIS71401.1
Peptide/nickel transport system permease protein.
 
 
  0.772
SIS75332.1
Peptide/nickel transport system permease protein.
 
 
  0.768
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.