STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT11005.1HNH endonuclease. (119 aa)    
Predicted Functional Partners:
SIT11034.1
Phage portal protein, HK97 family.
 
  
 0.955
SIT11019.1
Phage prohead protease, HK97 family/phage major capsid protein, HK97 family,TIGR01554.
 
     0.934
SIT15007.1
Type IV secretion system protein VirD4.
   
 
 0.904
SIS65147.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
  
 0.892
SIS65159.1
Phage terminase, small subunit, putative, P27 family.
 
    0.861
SIT11012.1
Hypothetical protein.
       0.807
SIT11028.1
Phage tail tube protein, GTA-gp10.
       0.778
SIS88978.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.695
cysN
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
  0.684
SIT11042.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
  
 0.658
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.