STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT12452.1DNA-binding transcriptional regulator, GntR family. (223 aa)    
Predicted Functional Partners:
SIT12459.1
Short chain enoyl-CoA hydratase.
       0.773
SIT12465.1
malonyl-CoA/methylmalonyl-CoA synthetase.
       0.773
SIS69014.1
Transcriptional regulator, GntR family.
  
     0.772
SIS89884.1
Transcriptional regulator, GntR family.
  
     0.770
SIS94155.1
DNA-binding transcriptional regulator, GntR family.
  
     0.769
SIS53922.1
Transcriptional regulator, GntR family.
  
    0.753
SIS63867.1
Transcriptional regulator, GntR family.
  
    0.749
SIS66140.1
Transcriptional regulator, GntR family.
  
     0.738
SIS50350.1
Transcriptional regulator, GntR family.
  
    0.704
SIT13494.1
Transcriptional regulator, GntR family.
  
     0.669
Your Current Organism:
Paracoccus saliphilus
NCBI taxonomy Id: 405559
Other names: CCTCC AB 206074, DSM 18447, KCTC 22163, P. saliphilus, Paracoccus saliphilus Wang et al. 2009, YIM 90738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.