STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO93572.1Animal haem peroxidase. (488 aa)    
Predicted Functional Partners:
SDP15355.1
Streptogramin lyase.
  
  
  0.648
SDO97197.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 
 0.641
SDP19215.1
IMP dehydrogenase.
    
  0.575
SDP29696.1
Hypothetical protein.
  
  0.545
SDP84319.1
Intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
 
  0.543
SDP33260.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
    0.527
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
  
  
 0.520
SDP30934.1
Beta-glucosidase.
   
   0.518
SDP27866.1
Hypothetical protein.
  
  0.504
SDP60816.1
Phage major capsid protein, HK97 family.
   
   0.503
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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