STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP00554.1Carbon-monoxide dehydrogenase medium subunit. (283 aa)    
Predicted Functional Partners:
SDP00613.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SDP00584.1
Carbon-monoxide dehydrogenase large subunit.
 0.994
SDP85402.1
Carbon-monoxide dehydrogenase small subunit.
 0.992
SDP20407.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.975
SDP85369.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.958
SDP20453.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.935
SDP00534.1
Carbon monoxide dehydrogenase subunit G.
 
 
 0.930
SDP00727.1
Xanthine dehydrogenase accessory factor.
 
 
 0.848
SDP00756.1
Hypothetical protein.
 
     0.819
SDP85327.1
Xanthine dehydrogenase accessory factor.
 
 
 0.816
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.