STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP36987.1Cytochrome P450. (409 aa)    
Predicted Functional Partners:
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
 
 0.999
SDP95708.1
AMP-binding enzyme.
 
 0.999
SDP94601.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.964
SDP78831.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.840
SDP95736.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.815
SDP36830.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.811
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.775
rplF
Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.734
SDP36910.1
Cyclopropane fatty-acyl-phospholipid synthase.
   
  0.726
SDP95733.1
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
  
 0.693
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.