STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP55763.1FAD/FMN-containing dehydrogenase. (461 aa)    
Predicted Functional Partners:
SDP55779.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
    0.826
SDP93772.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.724
SDP91556.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.688
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 
 0.575
SDP30496.1
Lactate 2-monooxygenase.
  
 0.569
SDP95708.1
AMP-binding enzyme.
  
 
 0.544
SDP67776.1
Electron transfer flavoprotein beta subunit.
  
   0.522
SDP67761.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
   0.520
SDP55724.1
Nucleotide-binding universal stress protein, UspA family.
       0.497
SDP55743.1
Adenylate cyclase.
       0.497
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.