STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP52657.1FAD/FMN-containing dehydrogenase. (475 aa)    
Predicted Functional Partners:
SDP93772.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.724
SDP30496.1
Lactate 2-monooxygenase.
 
 0.669
SDP91556.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.628
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 
 0.575
SDP95708.1
AMP-binding enzyme.
  
 
 0.544
SDP67776.1
Electron transfer flavoprotein beta subunit.
  
   0.522
SDP67761.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
   0.520
SDO99062.1
Glutamine cyclotransferase.
    
   0.452
SDP52638.1
Glucoamylase.
       0.438
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
  0.423
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.