STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP65096.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
SDP65037.1
Hypothetical protein.
 
     0.889
SDP64985.1
Hypothetical protein.
 
     0.872
SDP65029.1
Hypothetical protein.
 
     0.868
SDP64997.1
Hypothetical protein.
 
     0.845
SDP65013.1
AAA-like domain-containing protein.
 
     0.840
SDP12051.1
Type VII secretion-associated protein, Rv3446c family, C-terminal domain-containing protein; Belongs to the heat shock protein 70 family.
  
 
   0.802
SDP56494.1
Protein of unknown function.
  
    0.778
SDO91340.1
EspG family protein.
  
     0.774
SDP11890.1
Hypothetical protein.
  
     0.774
SDP11914.1
Type VII secretion protein EccE.
  
     0.774
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.