STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureCUrease subunit alpha. (579 aa)    
Predicted Functional Partners:
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 0.999
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 0.999
SDP69136.1
Urease accessory protein.
 
 
 0.997
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.996
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.948
SDP84700.1
Sensor histidine kinase inhibitor, KipI family.
     
 0.793
SDP88170.1
Acetyltransferase (GNAT) family protein.
    
  0.790
alc
Allantoicase; Belongs to the allantoicase family.
    
  0.787
SDO96097.1
Arginase; Belongs to the arginase family.
    
  0.786
SDP84710.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
     
 0.740
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.