Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO88257.1 | SDP44240.1 | SAMN04487905_10111 | SAMN04487905_104128 | Hypothetical protein. | Hypothetical protein. | 0.746 |
SDO88257.1 | SDP61749.1 | SAMN04487905_10111 | SAMN04487905_10679 | Hypothetical protein. | Hypothetical protein. | 0.663 |
SDO88257.1 | SDP69720.1 | SAMN04487905_10111 | SAMN04487905_107153 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.704 |
SDO88257.1 | SDP69734.1 | SAMN04487905_10111 | SAMN04487905_107154 | Hypothetical protein. | Hypothetical protein. | 0.614 |
SDO88257.1 | SDP69928.1 | SAMN04487905_10111 | SAMN04487905_107170 | Hypothetical protein. | Hypothetical protein. | 0.747 |
SDO88257.1 | SDP80924.1 | SAMN04487905_10111 | SAMN04487905_109171 | Hypothetical protein. | Hypothetical protein. | 0.680 |
SDO88257.1 | SDP96149.1 | SAMN04487905_10111 | SAMN04487905_11947 | Hypothetical protein. | Hypothetical protein. | 0.719 |
SDP13588.1 | SDP69720.1 | SAMN04487905_102127 | SAMN04487905_107153 | MerR HTH family regulatory protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.713 |
SDP13588.1 | SDP69734.1 | SAMN04487905_102127 | SAMN04487905_107154 | MerR HTH family regulatory protein. | Hypothetical protein. | 0.553 |
SDP13588.1 | SDP80924.1 | SAMN04487905_102127 | SAMN04487905_109171 | MerR HTH family regulatory protein. | Hypothetical protein. | 0.452 |
SDP44240.1 | SDO88257.1 | SAMN04487905_104128 | SAMN04487905_10111 | Hypothetical protein. | Hypothetical protein. | 0.746 |
SDP44240.1 | SDP61749.1 | SAMN04487905_104128 | SAMN04487905_10679 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SDP44240.1 | SDP69720.1 | SAMN04487905_104128 | SAMN04487905_107153 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.708 |
SDP44240.1 | SDP69928.1 | SAMN04487905_104128 | SAMN04487905_107170 | Hypothetical protein. | Hypothetical protein. | 0.758 |
SDP44240.1 | SDP80924.1 | SAMN04487905_104128 | SAMN04487905_109171 | Hypothetical protein. | Hypothetical protein. | 0.742 |
SDP44240.1 | SDP96149.1 | SAMN04487905_104128 | SAMN04487905_11947 | Hypothetical protein. | Hypothetical protein. | 0.765 |
SDP61749.1 | SDO88257.1 | SAMN04487905_10679 | SAMN04487905_10111 | Hypothetical protein. | Hypothetical protein. | 0.663 |
SDP61749.1 | SDP44240.1 | SAMN04487905_10679 | SAMN04487905_104128 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SDP61749.1 | SDP69720.1 | SAMN04487905_10679 | SAMN04487905_107153 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.688 |
SDP61749.1 | SDP69734.1 | SAMN04487905_10679 | SAMN04487905_107154 | Hypothetical protein. | Hypothetical protein. | 0.485 |
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