STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP79193.1acetyl-CoA carboxylase carboxyltransferase subunit beta/acetyl-CoA carboxylase carboxyltransferase subunit alpha. (512 aa)    
Predicted Functional Partners:
SDO91527.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 0.959
SDP78628.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 0.948
SDP95708.1
AMP-binding enzyme.
  
 0.934
SDP68055.1
methylmalonyl-CoA epimerase.
 
 
  0.920
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 0.920
SDP94601.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 
 0.870
SDP95736.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 
 0.853
SDP94470.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.791
SDP54488.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.759
SDP69644.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.759
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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