STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP85304.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
SDP03732.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
  
     0.772
SDP71648.1
Hypothetical protein.
  
     0.761
SDP80924.1
Hypothetical protein.
  
     0.761
SDP14168.1
Hypothetical protein.
  
     0.750
SDP96149.1
Hypothetical protein.
  
     0.749
SDP65096.1
Hypothetical protein.
  
     0.746
SDP78514.1
Hypothetical protein.
  
     0.742
SDP96090.1
Hypothetical protein.
  
     0.740
SDP53956.1
Hypothetical protein.
  
     0.737
SDP89857.1
EspG family protein.
  
     0.737
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.