STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP86617.1Probable F420-dependent oxidoreductase, MSMEG_2516 family. (300 aa)    
Predicted Functional Partners:
SDP95708.1
AMP-binding enzyme.
  
 0.813
SDP95702.1
AMP-binding enzyme C-terminal domain-containing protein.
   
 0.802
SDP93122.1
Luciferase-like monooxygenase.
  
     0.670
SDO88607.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
  
 0.666
SDO88583.1
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.648
SDP55507.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.627
SDP93434.1
FMN reductase.
  
  0.604
SDP00233.1
ABC transporter.
  
 
 0.561
SDP00153.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.552
SDP95171.1
Hypothetical protein.
  
     0.546
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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