STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP93061.1Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. (554 aa)    
Predicted Functional Partners:
SDP93069.1
Cytochrome d ubiquinol oxidase subunit II.
 
 0.999
SDP93076.1
ATP-binding cassette, subfamily C, CydCD.
 
  
 0.999
SDP16174.1
Succinate dehydrogenase subunit A.
     
 0.668
SDP84772.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
     
 0.668
SDP16147.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.620
SDP84782.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.620
SDP16229.1
Succinate dehydrogenase subunit C.
     
 0.575
SDP55664.1
L-proline dehydrogenase.
     
 0.544
SDP16203.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
     
 0.517
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
  
 0.478
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.