STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP96911.1FAD/FMN-containing dehydrogenase. (451 aa)    
Predicted Functional Partners:
SDP96915.1
Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.822
SDP96918.1
Aspartate/methionine/tyrosine aminotransferase.
  
 
  0.789
SDP96908.1
Hypothetical protein.
       0.773
SDP96922.1
Serine hydroxymethyltransferase.
       0.773
SDP96927.1
L-alanine-DL-glutamate epimerase.
       0.773
SDP96932.1
phenylacetate-CoA ligase.
       0.773
SDP93772.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.724
SDP30496.1
Lactate 2-monooxygenase.
 
 0.676
SDP96905.1
Multidrug resistance protein, MATE family.
       0.631
SDP91556.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.628
Your Current Organism:
Actinopolyspora xinjiangensis
NCBI taxonomy Id: 405564
Other names: A. xinjiangensis, Actinopolyspora xinjiangensis Guan et al. 2011, CCTCC AA 209080, DSM 46732, KCTC 19656, strain TRM 40136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.