STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF76133.1Acetyl esterase/lipase. (372 aa)    
Predicted Functional Partners:
SDH73476.1
Amino acid adenylation domain-containing protein.
  
 0.973
SDH73106.1
HxxPF-repeated domain-containing protein.
  
 0.752
SDG30205.1
Hypothetical protein.
 
 
  0.722
SDH56290.1
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
  0.704
SDH56317.1
NADH-quinone oxidoreductase subunit E.
    
  0.698
SDH71526.1
Amino acid adenylation domain-containing protein.
  
 0.679
SDH56254.1
NADH dehydrogenase subunit G.
    
 0.658
SDF76104.1
SpoIIAA-like.
       0.581
SDF76077.1
Hypothetical protein.
       0.556
SDF76047.1
Small conductance mechanosensitive channel.
       0.530
Your Current Organism:
Pedobacter terrae
NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.