Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF64069.1 | SDG07898.1 | SAMN05421827_10163 | SAMN05421827_103157 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.421 |
SDG07898.1 | SDF64069.1 | SAMN05421827_103157 | SAMN05421827_10163 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.421 |
SDG07898.1 | SDG07927.1 | SAMN05421827_103157 | SAMN05421827_103158 | Hypothetical protein. | Hypothetical protein. | 0.707 |
SDG07898.1 | SDG08000.1 | SAMN05421827_103157 | SAMN05421827_103159 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.618 |
SDG07898.1 | SDG32888.1 | SAMN05421827_103157 | SAMN05421827_105159 | Hypothetical protein. | Hypothetical protein. | 0.492 |
SDG07898.1 | SDG34504.1 | SAMN05421827_103157 | SAMN05421827_105228 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.438 |
SDG07898.1 | SDG34568.1 | SAMN05421827_103157 | SAMN05421827_105229 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.459 |
SDG07898.1 | thiE-2 | SAMN05421827_103157 | SAMN05421827_103156 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.554 |
SDG07927.1 | SDG07898.1 | SAMN05421827_103158 | SAMN05421827_103157 | Hypothetical protein. | Hypothetical protein. | 0.707 |
SDG07927.1 | SDG08000.1 | SAMN05421827_103158 | SAMN05421827_103159 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.820 |
SDG07927.1 | thiE-2 | SAMN05421827_103158 | SAMN05421827_103156 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.571 |
SDG08000.1 | SDG07898.1 | SAMN05421827_103159 | SAMN05421827_103157 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.618 |
SDG08000.1 | SDG07927.1 | SAMN05421827_103159 | SAMN05421827_103158 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.820 |
SDG08000.1 | thiE-2 | SAMN05421827_103159 | SAMN05421827_103156 | Ribosomal protein S18 acetylase RimI. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.432 |
SDG32888.1 | SDG07898.1 | SAMN05421827_105159 | SAMN05421827_103157 | Hypothetical protein. | Hypothetical protein. | 0.492 |
SDG34504.1 | SDG07898.1 | SAMN05421827_105228 | SAMN05421827_103157 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.438 |
SDG34504.1 | SDG34568.1 | SAMN05421827_105228 | SAMN05421827_105229 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.957 |
SDG34568.1 | SDG07898.1 | SAMN05421827_105229 | SAMN05421827_103157 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.459 |
SDG34568.1 | SDG34504.1 | SAMN05421827_105229 | SAMN05421827_105228 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.957 |
thiE-2 | SDG07898.1 | SAMN05421827_103156 | SAMN05421827_103157 | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | Hypothetical protein. | 0.554 |
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