Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF76477.1 | SDG07747.1 | SAMN05421827_101459 | SAMN05421827_103152 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl-phosphate synthase large subunit. | 0.977 |
SDF76477.1 | SDG41794.1 | SAMN05421827_101459 | SAMN05421827_106147 | Glutamate synthase (NADPH/NADH) large chain. | Asparagine synthase (glutamine-hydrolysing). | 0.965 |
SDF76477.1 | SDG48536.1 | SAMN05421827_101459 | SAMN05421827_10734 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.997 |
SDF76477.1 | SDG80528.1 | SAMN05421827_101459 | SAMN05421827_111111 | Glutamate synthase (NADPH/NADH) large chain. | 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.912 |
SDF76477.1 | guaA | SAMN05421827_101459 | SAMN05421827_113124 | Glutamate synthase (NADPH/NADH) large chain. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.974 |
SDF76477.1 | proA | SAMN05421827_101459 | SAMN05421827_10360 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.922 |
SDF76477.1 | proB | SAMN05421827_101459 | SAMN05421827_10359 | Glutamate synthase (NADPH/NADH) large chain. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.956 |
SDF76477.1 | pyrG | SAMN05421827_101459 | SAMN05421827_109193 | Glutamate synthase (NADPH/NADH) large chain. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.976 |
SDG07747.1 | SDF76477.1 | SAMN05421827_103152 | SAMN05421827_101459 | Carbamoyl-phosphate synthase large subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.977 |
SDG07747.1 | SDG41794.1 | SAMN05421827_103152 | SAMN05421827_106147 | Carbamoyl-phosphate synthase large subunit. | Asparagine synthase (glutamine-hydrolysing). | 0.585 |
SDG07747.1 | SDG48536.1 | SAMN05421827_103152 | SAMN05421827_10734 | Carbamoyl-phosphate synthase large subunit. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.612 |
SDG07747.1 | guaA | SAMN05421827_103152 | SAMN05421827_113124 | Carbamoyl-phosphate synthase large subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.835 |
SDG07747.1 | proB | SAMN05421827_103152 | SAMN05421827_10359 | Carbamoyl-phosphate synthase large subunit. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.609 |
SDG07747.1 | pyrG | SAMN05421827_103152 | SAMN05421827_109193 | Carbamoyl-phosphate synthase large subunit. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.748 |
SDG41794.1 | SDF76477.1 | SAMN05421827_106147 | SAMN05421827_101459 | Asparagine synthase (glutamine-hydrolysing). | Glutamate synthase (NADPH/NADH) large chain. | 0.965 |
SDG41794.1 | SDG07747.1 | SAMN05421827_106147 | SAMN05421827_103152 | Asparagine synthase (glutamine-hydrolysing). | Carbamoyl-phosphate synthase large subunit. | 0.585 |
SDG41794.1 | SDG48536.1 | SAMN05421827_106147 | SAMN05421827_10734 | Asparagine synthase (glutamine-hydrolysing). | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.590 |
SDG41794.1 | proB | SAMN05421827_106147 | SAMN05421827_10359 | Asparagine synthase (glutamine-hydrolysing). | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.616 |
SDG48536.1 | SDF76477.1 | SAMN05421827_10734 | SAMN05421827_101459 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADPH/NADH) large chain. | 0.997 |
SDG48536.1 | SDG07747.1 | SAMN05421827_10734 | SAMN05421827_103152 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Carbamoyl-phosphate synthase large subunit. | 0.612 |
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