node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG18342.1 | rnc | SAMN05421827_10451 | SAMN05421827_10481 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.954 |
SDG18342.1 | rplC | SAMN05421827_10451 | SAMN05421827_11149 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.994 |
SDG18342.1 | rplD | SAMN05421827_10451 | SAMN05421827_11150 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.994 |
SDG18342.1 | rplM | SAMN05421827_10451 | SAMN05421827_10452 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
SDG18342.1 | rplS | SAMN05421827_10451 | SAMN05421827_10346 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.992 |
SDG18342.1 | rpmA | SAMN05421827_10451 | SAMN05421827_10186 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.994 |
SDG18342.1 | rpsB | SAMN05421827_10451 | SAMN05421827_10450 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
SDG18342.1 | rpsF | SAMN05421827_10451 | SAMN05421827_10632 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
SDG18342.1 | rpsO | SAMN05421827_10451 | SAMN05421827_101240 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
SDG18342.1 | rpsP | SAMN05421827_10451 | SAMN05421827_10336 | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
rnc | SDG18342.1 | SAMN05421827_10481 | SAMN05421827_10451 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.954 |
rnc | rplC | SAMN05421827_10481 | SAMN05421827_11149 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.950 |
rnc | rplD | SAMN05421827_10481 | SAMN05421827_11150 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.945 |
rnc | rplM | SAMN05421827_10481 | SAMN05421827_10452 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.951 |
rnc | rplS | SAMN05421827_10481 | SAMN05421827_10346 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.947 |
rnc | rpmA | SAMN05421827_10481 | SAMN05421827_10186 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.949 |
rnc | rpsB | SAMN05421827_10481 | SAMN05421827_10450 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.950 |
rnc | rpsF | SAMN05421827_10481 | SAMN05421827_10632 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.947 |
rnc | rpsO | SAMN05421827_10481 | SAMN05421827_101240 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.947 |
rnc | rpsP | SAMN05421827_10481 | SAMN05421827_10336 | Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.948 |