STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG48864.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
SDG48886.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.689
SDG48833.1
Nucleotide-binding universal stress protein, UspA family.
       0.560
SDH31441.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region.
  
     0.506
SDG48918.1
Hypothetical protein.
       0.486
SDH04485.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.480
SDF66482.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
    
  0.468
SDF66515.1
PAS domain S-box-containing protein.
    
  0.468
SDH72933.1
Sensor domain CHASE3-containing protein.
    
  0.468
SDH72963.1
Hpt domain-containing protein.
    
  0.468
SDH67654.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.459
Your Current Organism:
Pedobacter terrae
NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.