Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG42895.1 | SDG58779.1 | SAMN05421827_106191 | SAMN05421827_10878 | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | Alpha-L-arabinofuranosidase. | 0.547 |
SDG42895.1 | SDG58804.1 | SAMN05421827_106191 | SAMN05421827_10879 | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase. | 0.581 |
SDG42895.1 | SDG58896.1 | SAMN05421827_106191 | SAMN05421827_10882 | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.634 |
SDG42895.1 | SDH16184.1 | SAMN05421827_106191 | SAMN05421827_1188 | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | Alpha-L-arabinofuranosidase. | 0.426 |
SDG42895.1 | araA | SAMN05421827_106191 | SAMN05421827_101484 | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.550 |
SDG58779.1 | SDG42895.1 | SAMN05421827_10878 | SAMN05421827_106191 | Alpha-L-arabinofuranosidase. | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | 0.547 |
SDG58779.1 | SDG58804.1 | SAMN05421827_10878 | SAMN05421827_10879 | Alpha-L-arabinofuranosidase. | alpha-N-arabinofuranosidase. | 0.971 |
SDG58779.1 | SDG58896.1 | SAMN05421827_10878 | SAMN05421827_10882 | Alpha-L-arabinofuranosidase. | Hypothetical protein. | 0.682 |
SDG58779.1 | SDG69119.1 | SAMN05421827_10878 | SAMN05421827_109176 | Alpha-L-arabinofuranosidase. | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | 0.429 |
SDG58779.1 | SDH40194.1 | SAMN05421827_10878 | SAMN05421827_12365 | Alpha-L-arabinofuranosidase. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.454 |
SDG58779.1 | SDH48126.1 | SAMN05421827_10878 | SAMN05421827_12617 | Alpha-L-arabinofuranosidase. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.600 |
SDG58779.1 | araA | SAMN05421827_10878 | SAMN05421827_101484 | Alpha-L-arabinofuranosidase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.860 |
SDG58779.1 | uxaC | SAMN05421827_10878 | SAMN05421827_103188 | Alpha-L-arabinofuranosidase. | Glucuronate isomerase. | 0.829 |
SDG58804.1 | SDG42895.1 | SAMN05421827_10879 | SAMN05421827_106191 | alpha-N-arabinofuranosidase. | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | 0.581 |
SDG58804.1 | SDG58779.1 | SAMN05421827_10879 | SAMN05421827_10878 | alpha-N-arabinofuranosidase. | Alpha-L-arabinofuranosidase. | 0.971 |
SDG58804.1 | SDG58896.1 | SAMN05421827_10879 | SAMN05421827_10882 | alpha-N-arabinofuranosidase. | Hypothetical protein. | 0.713 |
SDG58804.1 | SDG69119.1 | SAMN05421827_10879 | SAMN05421827_109176 | alpha-N-arabinofuranosidase. | Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family. | 0.577 |
SDG58804.1 | SDH16184.1 | SAMN05421827_10879 | SAMN05421827_1188 | alpha-N-arabinofuranosidase. | Alpha-L-arabinofuranosidase. | 0.807 |
SDG58804.1 | SDH40194.1 | SAMN05421827_10879 | SAMN05421827_12365 | alpha-N-arabinofuranosidase. | Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.620 |
SDG58804.1 | SDH48126.1 | SAMN05421827_10879 | SAMN05421827_12617 | alpha-N-arabinofuranosidase. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.612 |
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