STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG71851.1Uncharacterized iron-regulated membrane protein. (362 aa)    
Predicted Functional Partners:
SDG71873.1
Iron complex outermembrane recepter protein.
 
     0.845
SDG51842.1
Iron complex outermembrane recepter protein.
  
    0.686
SDG75439.1
Iron complex outermembrane recepter protein.
  
    0.670
SDF73640.1
Iron complex outermembrane recepter protein.
  
    0.654
SDH00213.1
Iron complex outermembrane recepter protein.
 
    0.654
SDG58591.1
Iron complex outermembrane recepter protein.
 
    0.648
SDH25156.1
Iron complex outermembrane recepter protein.
  
    0.579
SDG20289.1
Iron complex outermembrane recepter protein.
  
    0.566
SDG52309.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.520
SDF68747.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
  0.402
Your Current Organism:
Pedobacter terrae
NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.