STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG89836.1Thioredoxin reductase (NADPH). (336 aa)    
Predicted Functional Partners:
SDG89802.1
Ferredoxin, 2Fe-2S.
 
 
 
 0.959
SDF64293.1
Thioredoxin reductase (NADPH).
  
  
 
0.870
SDG99198.1
Cystathionine gamma-lyase/cystathionine beta-lyase.
   
 
 0.863
SDG86129.1
Thioredoxin.
   
 0.705
SDF76477.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.701
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.681
SDF68747.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.658
SDG86172.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.574
SDG98446.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.574
SDF70521.1
Thioredoxin 1.
   
 0.564
Your Current Organism:
Pedobacter terrae
NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.