Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF62143.1 | SDH71526.1 | SAMN05421827_1014 | SAMN05421827_1431 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Amino acid adenylation domain-containing protein. | 0.933 |
SDF62143.1 | SDH71555.1 | SAMN05421827_1014 | SAMN05421827_1432 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Ornithine cyclodeaminase. | 0.662 |
SDF62143.1 | SDH71632.1 | SAMN05421827_1014 | SAMN05421827_1435 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Diaminobutyrate-2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.574 |
SDF62143.1 | SDH71657.1 | SAMN05421827_1014 | SAMN05421827_1436 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Non-ribosomal peptide synthase domain TIGR01720. | 0.489 |
SDF62143.1 | SDH73106.1 | SAMN05421827_1014 | SAMN05421827_1511 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | HxxPF-repeated domain-containing protein. | 0.934 |
SDF62143.1 | SDH73476.1 | SAMN05421827_1014 | SAMN05421827_1541 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Amino acid adenylation domain-containing protein. | 0.949 |
SDG73150.1 | SDH71555.1 | SAMN05421827_11059 | SAMN05421827_1432 | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | Ornithine cyclodeaminase. | 0.732 |
SDH68302.1 | SDH71526.1 | SAMN05421827_1373 | SAMN05421827_1431 | Surfactin synthase thioesterase subunit. | Amino acid adenylation domain-containing protein. | 0.996 |
SDH68302.1 | SDH71555.1 | SAMN05421827_1373 | SAMN05421827_1432 | Surfactin synthase thioesterase subunit. | Ornithine cyclodeaminase. | 0.594 |
SDH68302.1 | SDH71657.1 | SAMN05421827_1373 | SAMN05421827_1436 | Surfactin synthase thioesterase subunit. | Non-ribosomal peptide synthase domain TIGR01720. | 0.725 |
SDH68302.1 | SDH73106.1 | SAMN05421827_1373 | SAMN05421827_1511 | Surfactin synthase thioesterase subunit. | HxxPF-repeated domain-containing protein. | 0.999 |
SDH68302.1 | SDH73476.1 | SAMN05421827_1373 | SAMN05421827_1541 | Surfactin synthase thioesterase subunit. | Amino acid adenylation domain-containing protein. | 0.996 |
SDH71526.1 | SDF62143.1 | SAMN05421827_1431 | SAMN05421827_1014 | Amino acid adenylation domain-containing protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.933 |
SDH71526.1 | SDH68302.1 | SAMN05421827_1431 | SAMN05421827_1373 | Amino acid adenylation domain-containing protein. | Surfactin synthase thioesterase subunit. | 0.996 |
SDH71526.1 | SDH71555.1 | SAMN05421827_1431 | SAMN05421827_1432 | Amino acid adenylation domain-containing protein. | Ornithine cyclodeaminase. | 0.786 |
SDH71526.1 | SDH71578.1 | SAMN05421827_1431 | SAMN05421827_1433 | Amino acid adenylation domain-containing protein. | Cysteine synthase A. | 0.632 |
SDH71526.1 | SDH71606.1 | SAMN05421827_1431 | SAMN05421827_1434 | Amino acid adenylation domain-containing protein. | Cupin-like domain-containing protein. | 0.503 |
SDH71526.1 | SDH71632.1 | SAMN05421827_1431 | SAMN05421827_1435 | Amino acid adenylation domain-containing protein. | Diaminobutyrate-2-oxoglutarate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.863 |
SDH71526.1 | SDH71657.1 | SAMN05421827_1431 | SAMN05421827_1436 | Amino acid adenylation domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720. | 0.974 |
SDH71526.1 | SDH73106.1 | SAMN05421827_1431 | SAMN05421827_1511 | Amino acid adenylation domain-containing protein. | HxxPF-repeated domain-containing protein. | 0.999 |
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