STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC53638.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)    
Predicted Functional Partners:
SMD12508.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.998
SMD24776.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.994
SMD23632.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.925
SMD23076.1
3-hydroxyacyl-CoA dehydrogenase.
 0.913
SMC59266.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.900
SMD24018.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.892
SMD21412.1
acetoacetyl-CoA synthetase.
  
 
  0.850
SMD02727.1
Malate synthase; Belongs to the malate synthase family.
   
 
 0.840
SMC68722.1
hydroxymethylglutaryl-CoA lyase.
  
 
  0.833
SMC53655.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.832
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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