Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC53638.1 | SMC53655.1 | SAMN05660733_00330 | SAMN05660733_00332 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-oxoacid CoA-transferase subunit B. | 0.832 |
SMC53638.1 | SMC59266.1 | SAMN05660733_00330 | SAMN05660733_00645 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.900 |
SMC53638.1 | SMC68722.1 | SAMN05660733_00330 | SAMN05660733_01147 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA lyase. | 0.833 |
SMC53638.1 | SMD02727.1 | SAMN05660733_00330 | SAMN05660733_03473 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Malate synthase; Belongs to the malate synthase family. | 0.840 |
SMC53638.1 | SMD12508.1 | SAMN05660733_00330 | SAMN05660733_04451 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.998 |
SMC53638.1 | SMD21412.1 | SAMN05660733_00330 | SAMN05660733_06369 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetoacetyl-CoA synthetase. | 0.850 |
SMC53638.1 | SMD23076.1 | SAMN05660733_00330 | SAMN05660733_07085 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.913 |
SMC53638.1 | SMD23632.1 | SAMN05660733_00330 | SAMN05660733_07314 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.925 |
SMC53638.1 | SMD24018.1 | SAMN05660733_00330 | SAMN05660733_07549 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.892 |
SMC53638.1 | SMD24776.1 | SAMN05660733_00330 | SAMN05660733_07857 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.994 |
SMC53655.1 | SMC53638.1 | SAMN05660733_00332 | SAMN05660733_00330 | 3-oxoacid CoA-transferase subunit B. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.832 |
SMC53655.1 | SMC59266.1 | SAMN05660733_00332 | SAMN05660733_00645 | 3-oxoacid CoA-transferase subunit B. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.796 |
SMC53655.1 | SMC68722.1 | SAMN05660733_00332 | SAMN05660733_01147 | 3-oxoacid CoA-transferase subunit B. | hydroxymethylglutaryl-CoA lyase. | 0.917 |
SMC53655.1 | SMD12508.1 | SAMN05660733_00332 | SAMN05660733_04451 | 3-oxoacid CoA-transferase subunit B. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.932 |
SMC53655.1 | SMD21412.1 | SAMN05660733_00332 | SAMN05660733_06369 | 3-oxoacid CoA-transferase subunit B. | acetoacetyl-CoA synthetase. | 0.881 |
SMC53655.1 | SMD23076.1 | SAMN05660733_00332 | SAMN05660733_07085 | 3-oxoacid CoA-transferase subunit B. | 3-hydroxyacyl-CoA dehydrogenase. | 0.835 |
SMC53655.1 | SMD23632.1 | SAMN05660733_00332 | SAMN05660733_07314 | 3-oxoacid CoA-transferase subunit B. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.892 |
SMC53655.1 | SMD24018.1 | SAMN05660733_00332 | SAMN05660733_07549 | 3-oxoacid CoA-transferase subunit B. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.835 |
SMC53655.1 | SMD24776.1 | SAMN05660733_00332 | SAMN05660733_07857 | 3-oxoacid CoA-transferase subunit B. | 3-hydroxyacyl-CoA dehydrogenase. | 0.848 |
SMC59266.1 | SMC53638.1 | SAMN05660733_00645 | SAMN05660733_00330 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.900 |
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