STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC69100.1Hypothetical protein; Belongs to the UPF0434 family. (66 aa)    
Predicted Functional Partners:
SMC69102.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
 
     0.890
SMC69089.1
Phosphomannomutase.
    
  0.886
SMC69107.1
Mannose-6-phosphate isomerase, type 1.
    
  0.877
SMD24261.1
Hypothetical protein.
  
     0.683
SMD14740.1
Hypothetical protein.
  
     0.673
tmk-3
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
     0.670
SMC69079.1
Protein of unknown function.
       0.657
SMC69111.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.637
SMD12944.1
Protein of unknown function.
  
     0.621
SMD20395.1
Helix-turn-helix.
  
     0.617
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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