Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC78771.1 | SMC78779.1 | SAMN05660733_01707 | SAMN05660733_01708 | Hypothetical protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.444 |
SMC78779.1 | SMC78771.1 | SAMN05660733_01708 | SAMN05660733_01707 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Hypothetical protein. | 0.444 |
SMC78779.1 | SMC90810.1 | SAMN05660733_01708 | SAMN05660733_02593 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | V8-like Glu-specific endopeptidase. | 0.461 |
SMC78779.1 | SMD20663.1 | SAMN05660733_01708 | SAMN05660733_05971 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | AAA domain-containing protein. | 0.491 |
SMC78779.1 | SMD22896.1 | SAMN05660733_01708 | SAMN05660733_07020 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Hypothetical protein. | 0.441 |
SMC78779.1 | SMD22901.1 | SAMN05660733_01708 | SAMN05660733_07022 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.410 |
SMC90810.1 | SMC78779.1 | SAMN05660733_02593 | SAMN05660733_01708 | V8-like Glu-specific endopeptidase. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.461 |
SMC90810.1 | SMD22896.1 | SAMN05660733_02593 | SAMN05660733_07020 | V8-like Glu-specific endopeptidase. | Hypothetical protein. | 0.519 |
SMC90810.1 | SMD22901.1 | SAMN05660733_02593 | SAMN05660733_07022 | V8-like Glu-specific endopeptidase. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.561 |
SMD20663.1 | SMC78779.1 | SAMN05660733_05971 | SAMN05660733_01708 | AAA domain-containing protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.491 |
SMD22896.1 | SMC78779.1 | SAMN05660733_07020 | SAMN05660733_01708 | Hypothetical protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.441 |
SMD22896.1 | SMC90810.1 | SAMN05660733_07020 | SAMN05660733_02593 | Hypothetical protein. | V8-like Glu-specific endopeptidase. | 0.519 |
SMD22896.1 | SMD22901.1 | SAMN05660733_07020 | SAMN05660733_07022 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.956 |
SMD22901.1 | SMC78779.1 | SAMN05660733_07022 | SAMN05660733_01708 | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.410 |
SMD22901.1 | SMC90810.1 | SAMN05660733_07022 | SAMN05660733_02593 | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | V8-like Glu-specific endopeptidase. | 0.561 |
SMD22901.1 | SMD22896.1 | SAMN05660733_07022 | SAMN05660733_07020 | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.956 |