Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC77808.1 | SMC77871.1 | SAMN05660733_01640 | SAMN05660733_01645 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.999 |
SMC77808.1 | SMC87896.1 | SAMN05660733_01640 | SAMN05660733_02211 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.787 |
SMC77808.1 | SMC88938.1 | SAMN05660733_01640 | SAMN05660733_02374 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.916 |
SMC77808.1 | SMD24840.1 | SAMN05660733_01640 | SAMN05660733_07921 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.999 |
SMC77808.1 | gcvP | SAMN05660733_01640 | SAMN05660733_05110 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
SMC77871.1 | SMC77808.1 | SAMN05660733_01645 | SAMN05660733_01640 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.999 |
SMC77871.1 | SMC87896.1 | SAMN05660733_01645 | SAMN05660733_02211 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.657 |
SMC77871.1 | SMC88938.1 | SAMN05660733_01645 | SAMN05660733_02374 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.914 |
SMC77871.1 | SMD24840.1 | SAMN05660733_01645 | SAMN05660733_07921 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.999 |
SMC77871.1 | gcvP | SAMN05660733_01645 | SAMN05660733_05110 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
SMC87882.1 | SMC87888.1 | SAMN05660733_02208 | SAMN05660733_02209 | Alpha/beta hydrolase family protein. | Predicted NAD/FAD-binding protein. | 0.913 |
SMC87882.1 | SMC87892.1 | SAMN05660733_02208 | SAMN05660733_02210 | Alpha/beta hydrolase family protein. | Hypothetical protein. | 0.934 |
SMC87882.1 | SMC87896.1 | SAMN05660733_02208 | SAMN05660733_02211 | Alpha/beta hydrolase family protein. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.904 |
SMC87882.1 | SMC88938.1 | SAMN05660733_02208 | SAMN05660733_02374 | Alpha/beta hydrolase family protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.749 |
SMC87882.1 | SMD12449.1 | SAMN05660733_02208 | SAMN05660733_04436 | Alpha/beta hydrolase family protein. | Steroid 5-alpha reductase family enzyme. | 0.626 |
SMC87888.1 | SMC87882.1 | SAMN05660733_02209 | SAMN05660733_02208 | Predicted NAD/FAD-binding protein. | Alpha/beta hydrolase family protein. | 0.913 |
SMC87888.1 | SMC87892.1 | SAMN05660733_02209 | SAMN05660733_02210 | Predicted NAD/FAD-binding protein. | Hypothetical protein. | 0.989 |
SMC87888.1 | SMC87896.1 | SAMN05660733_02209 | SAMN05660733_02211 | Predicted NAD/FAD-binding protein. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.996 |
SMC87888.1 | SMD12449.1 | SAMN05660733_02209 | SAMN05660733_04436 | Predicted NAD/FAD-binding protein. | Steroid 5-alpha reductase family enzyme. | 0.928 |
SMC87892.1 | SMC87882.1 | SAMN05660733_02210 | SAMN05660733_02208 | Hypothetical protein. | Alpha/beta hydrolase family protein. | 0.934 |
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