STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC88306.1Streptogrisin C. (480 aa)    
Predicted Functional Partners:
SMC53019.1
Hypothetical protein.
  
     0.761
SMC54829.1
Hypothetical protein.
  
     0.759
SMC91909.1
Hypothetical protein.
  
     0.744
SMC98037.1
Alpha-L-fucosidase.
  
     0.734
SMC96454.1
TcdA/TcdB catalytic glycosyltransferase domain-containing protein.
  
     0.716
SMD17294.1
Protein of unknown function.
  
     0.714
SMD22253.1
Hypothetical protein.
  
     0.711
SMC91038.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.710
SMD02206.1
Hypothetical protein.
  
     0.705
SMD20787.1
Subtilase family protein.
  
     0.693
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.