Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC65662.1 | SMC78286.1 | SAMN05660733_00797 | SAMN05660733_01670 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-NADP reductase. | 0.648 |
SMC65662.1 | SMC89571.1 | SAMN05660733_00797 | SAMN05660733_02454 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.580 |
SMC65662.1 | SMC89621.1 | SAMN05660733_00797 | SAMN05660733_02459 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | dTDP-L-rhamnose 4-epimerase. | 0.532 |
SMC65662.1 | SMC90959.1 | SAMN05660733_00797 | SAMN05660733_02606 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-NADP reductase. | 0.671 |
SMC78286.1 | SMC65662.1 | SAMN05660733_01670 | SAMN05660733_00797 | Ferredoxin-NADP reductase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.648 |
SMC78286.1 | SMC89571.1 | SAMN05660733_01670 | SAMN05660733_02454 | Ferredoxin-NADP reductase. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.580 |
SMC78286.1 | SMC89621.1 | SAMN05660733_01670 | SAMN05660733_02459 | Ferredoxin-NADP reductase. | dTDP-L-rhamnose 4-epimerase. | 0.532 |
SMC78286.1 | SMC90959.1 | SAMN05660733_01670 | SAMN05660733_02606 | Ferredoxin-NADP reductase. | Ferredoxin-NADP reductase. | 0.793 |
SMC89571.1 | SMC65662.1 | SAMN05660733_02454 | SAMN05660733_00797 | Oxidoreductase molybdopterin binding domain-containing protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.580 |
SMC89571.1 | SMC78286.1 | SAMN05660733_02454 | SAMN05660733_01670 | Oxidoreductase molybdopterin binding domain-containing protein. | Ferredoxin-NADP reductase. | 0.580 |
SMC89571.1 | SMC89586.1 | SAMN05660733_02454 | SAMN05660733_02455 | Oxidoreductase molybdopterin binding domain-containing protein. | Methyltransferase domain-containing protein. | 0.955 |
SMC89571.1 | SMC89595.1 | SAMN05660733_02454 | SAMN05660733_02456 | Oxidoreductase molybdopterin binding domain-containing protein. | Hypothetical protein. | 0.954 |
SMC89571.1 | SMC89602.1 | SAMN05660733_02454 | SAMN05660733_02457 | Oxidoreductase molybdopterin binding domain-containing protein. | Glycosyl transferase family 2. | 0.952 |
SMC89571.1 | SMC89611.1 | SAMN05660733_02454 | SAMN05660733_02458 | Oxidoreductase molybdopterin binding domain-containing protein. | Hypothetical protein. | 0.899 |
SMC89571.1 | SMC89621.1 | SAMN05660733_02454 | SAMN05660733_02459 | Oxidoreductase molybdopterin binding domain-containing protein. | dTDP-L-rhamnose 4-epimerase. | 0.800 |
SMC89571.1 | SMC90959.1 | SAMN05660733_02454 | SAMN05660733_02606 | Oxidoreductase molybdopterin binding domain-containing protein. | Ferredoxin-NADP reductase. | 0.644 |
SMC89571.1 | SMD14832.1 | SAMN05660733_02454 | SAMN05660733_04740 | Oxidoreductase molybdopterin binding domain-containing protein. | Ubiquinol-cytochrome c reductase cytochrome c subunit. | 0.831 |
SMC89571.1 | cysC | SAMN05660733_02454 | SAMN05660733_06116 | Oxidoreductase molybdopterin binding domain-containing protein. | Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.747 |
SMC89586.1 | SMC89571.1 | SAMN05660733_02455 | SAMN05660733_02454 | Methyltransferase domain-containing protein. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.955 |
SMC89586.1 | SMC89595.1 | SAMN05660733_02455 | SAMN05660733_02456 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.984 |
page 1 of 3