STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC92419.1Mannan endo-1,4-beta-mannosidase. (753 aa)    
Predicted Functional Partners:
SMC92057.1
Chitin-binding protein.
 
  
 0.769
SMC93044.1
Poly(3-hydroxybutyrate) depolymerase.
  
     0.739
SMC53076.1
Ricin-type beta-trefoil lectin domain-like.
 
     0.737
SMC70337.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
0.734
SMC53350.1
Cellulose 1,4-beta-cellobiosidase.
  
  0.723
SMC53820.1
UDPglucose 6-dehydrogenase.
    
  0.720
SMC92987.1
Pectate lyase.
  
     0.720
SMD20577.1
UDPglucose 6-dehydrogenase.
    
  0.720
SMC49236.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.694
SMC82119.1
Cellulose binding domain-containing protein.
  
     0.681
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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