STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC97581.1Hypothetical protein. (733 aa)    
Predicted Functional Partners:
SMC97646.1
VWA domain containing CoxE-like protein.
     0.954
SMC97652.1
Hypothetical protein.
 
     0.954
SMC97570.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
 
    0.951
SMC97577.1
MoxR-like ATPase.
 
   
 0.950
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.923
SMC97564.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
 
    0.895
SMD21530.1
VWA domain containing CoxE-like protein.
   
 0.857
SMC65932.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.768
SMD21523.1
AAA domain (dynein-related subfamily).
 
   
 0.756
SMD21107.1
AAA domain (dynein-related subfamily).
 
   
 0.722
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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