STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD06845.1Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. (203 aa)    
Predicted Functional Partners:
SMC90562.1
Methyltransferase domain-containing protein.
  
  
 0.733
rsmA
16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.733
SMC69102.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
     0.603
SMD14829.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
    0.598
SMD19690.1
Protein of unknown function.
  
     0.576
SMD22041.1
Hypothetical protein.
  
     0.576
SMD06898.1
Hypothetical protein; Belongs to the GcvT family.
 
    0.529
SMD14843.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.520
SMD23698.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.500
SMD06853.1
Sensor histidine kinase inhibitor, KipI family.
       0.497
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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