Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC71542.1 | SMD08098.1 | SAMN05660733_01456 | SAMN05660733_03976 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | Hypothetical protein. | 0.514 |
SMC71542.1 | SMD08102.1 | SAMN05660733_01456 | SAMN05660733_03977 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.571 |
SMC71542.1 | ribBA | SAMN05660733_01456 | SAMN05660733_07985 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.864 |
SMC88119.1 | SMD08098.1 | SAMN05660733_02310 | SAMN05660733_03976 | Hypothetical protein. | Hypothetical protein. | 0.470 |
SMC90059.1 | SMD08098.1 | SAMN05660733_02502 | SAMN05660733_03976 | Pyridoxine kinase; Belongs to the pyridoxine kinase family. | Hypothetical protein. | 0.499 |
SMD08098.1 | SMC71542.1 | SAMN05660733_03976 | SAMN05660733_01456 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | 0.514 |
SMD08098.1 | SMC88119.1 | SAMN05660733_03976 | SAMN05660733_02310 | Hypothetical protein. | Hypothetical protein. | 0.470 |
SMD08098.1 | SMC90059.1 | SAMN05660733_03976 | SAMN05660733_02502 | Hypothetical protein. | Pyridoxine kinase; Belongs to the pyridoxine kinase family. | 0.499 |
SMD08098.1 | SMD08102.1 | SAMN05660733_03976 | SAMN05660733_03977 | Hypothetical protein. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.694 |
SMD08098.1 | ribBA | SAMN05660733_03976 | SAMN05660733_07985 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.514 |
SMD08102.1 | SMC71542.1 | SAMN05660733_03977 | SAMN05660733_01456 | NAD(P)H-flavin reductase; Belongs to the globin family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | 0.571 |
SMD08102.1 | SMD08098.1 | SAMN05660733_03977 | SAMN05660733_03976 | NAD(P)H-flavin reductase; Belongs to the globin family. | Hypothetical protein. | 0.694 |
SMD08102.1 | ribBA | SAMN05660733_03977 | SAMN05660733_07985 | NAD(P)H-flavin reductase; Belongs to the globin family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.571 |
ribBA | SMC71542.1 | SAMN05660733_07985 | SAMN05660733_01456 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; In the N-terminal section; belongs to the DHBP synthase family. | 0.864 |
ribBA | SMD08098.1 | SAMN05660733_07985 | SAMN05660733_03976 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Hypothetical protein. | 0.514 |
ribBA | SMD08102.1 | SAMN05660733_07985 | SAMN05660733_03977 | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.571 |