STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD15040.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
SMC89157.1
Signal transduction histidine kinase.
  
 0.887
SMC57219.1
Two-component system, NarL family, response regulator DesR.
  
  0.639
SMC85505.1
Two component transcriptional regulator, LuxR family.
  
  0.639
SMD15063.1
Two-component system, NarL family, response regulator DesR.
  
  0.639
SMD15280.1
Two-component system, NarL family, response regulator DesR.
  
  0.639
SMD19925.1
Two-component system, NarL family, response regulator DesR.
  
  0.639
SMC90405.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.512
SMC88107.1
Regulatory protein, luxR family.
  
  0.498
SMD15034.1
Signal transduction histidine kinase.
      
0.444
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.