STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD19137.1Protein of unknown function. (213 aa)    
Predicted Functional Partners:
SMD25225.1
Protein of unknown function.
  
     0.712
SMC93108.1
Cellulose binding domain-containing protein.
  
     0.627
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.625
SMD19141.1
methionyl-tRNA formyltransferase.
       0.594
SMD04304.1
Phospholipase A2.
  
    0.592
SMC76389.1
Hypothetical protein.
  
     0.588
SMD19145.1
L-ornithine N5-oxygenase.
 
     0.573
SMC92404.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
  
     0.523
SMD20898.1
Protein of unknown function.
  
     0.502
SMD20761.1
Protein of unknown function.
  
     0.498
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.