Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMD19888.1 | SMD19889.1 | SAMN05660733_05721 | SAMN05660733_05722 | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | Helix-turn-helix domain-containing protein. | 0.538 |
SMD19888.1 | SMD19890.1 | SAMN05660733_05721 | SAMN05660733_05723 | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | Selenoprotein W-related protein. | 0.529 |
SMD19888.1 | SMD19891.1 | SAMN05660733_05721 | SAMN05660733_05724 | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | Hypothetical protein. | 0.404 |
SMD19889.1 | SMD19888.1 | SAMN05660733_05722 | SAMN05660733_05721 | Helix-turn-helix domain-containing protein. | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | 0.538 |
SMD19889.1 | SMD19890.1 | SAMN05660733_05722 | SAMN05660733_05723 | Helix-turn-helix domain-containing protein. | Selenoprotein W-related protein. | 0.773 |
SMD19889.1 | SMD19891.1 | SAMN05660733_05722 | SAMN05660733_05724 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.574 |
SMD19889.1 | nadE | SAMN05660733_05722 | SAMN05660733_06520 | Helix-turn-helix domain-containing protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.463 |
SMD19890.1 | SMD19888.1 | SAMN05660733_05723 | SAMN05660733_05721 | Selenoprotein W-related protein. | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | 0.529 |
SMD19890.1 | SMD19889.1 | SAMN05660733_05723 | SAMN05660733_05722 | Selenoprotein W-related protein. | Helix-turn-helix domain-containing protein. | 0.773 |
SMD19890.1 | SMD19891.1 | SAMN05660733_05723 | SAMN05660733_05724 | Selenoprotein W-related protein. | Hypothetical protein. | 0.574 |
SMD19891.1 | SMD19888.1 | SAMN05660733_05724 | SAMN05660733_05721 | Hypothetical protein. | Uncharacterized zinc-type alcohol dehydrogenase-like protein. | 0.404 |
SMD19891.1 | SMD19889.1 | SAMN05660733_05724 | SAMN05660733_05722 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.574 |
SMD19891.1 | SMD19890.1 | SAMN05660733_05724 | SAMN05660733_05723 | Hypothetical protein. | Selenoprotein W-related protein. | 0.574 |
nadE | SMD19889.1 | SAMN05660733_06520 | SAMN05660733_05722 | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Helix-turn-helix domain-containing protein. | 0.463 |