STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD20632.1Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. (375 aa)    
Predicted Functional Partners:
SMD20994.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 0.958
SMD20636.1
Predicted dehydrogenase.
 
  0.922
SMD20627.1
Transferase hexapeptide (six repeat-containing protein).
  
 0.896
SMD20629.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.885
SMC70260.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
 0.871
SMD20634.1
UDP-glucose 4-epimerase.
 
  0.860
SMC71992.1
Transferase hexapeptide (six repeat-containing protein).
 
  0.800
SMC68979.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.769
SMC68014.1
dTDP-glucose 4,6-dehydratase.
  
 
 0.766
SMC89509.1
Cupin.
  
 
 0.752
Your Current Organism:
Lentzea albidocapillata
NCBI taxonomy Id: 40571
Other names: ATCC 51859, CCUG 48294, CIP 104842, DSM 44073, IFO 15855, IMMIB D-958, IMSNU 21253, JCM 9732, L. albidocapillata, Lentzea albidicapillata, NBRC 100372, NBRC 15855, NRRL B-24057, Saccharothrix albidicapillata, Saccharothrix albidocapillata
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